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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906317.1_cds_XP_016456509.1_50335
CDS Infomation

[gene=LOC107780472] [db_xref=GeneID:107780472] [protein=xaa-Pro dipeptidase-like] [protein_id=XP_016456509.1] [location=join(109654..109809,109894..109943,110042..110102,114328..114423,114525..114674,116620..116831,118444..118564,118948..119031,119804..119845,120299..120369,122362..122415,122517..122622,122728..122796,123648..123791,123945..124076)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCTCCTTCTTCTTCATCATCATCTCTGTCTCCTCCGATGATTCCCATG
GAACTCCACTCACTCAATCGAGAGAAGCTTCTCAACTCTCTGCGCGAGCACCTATCTTCT
TCCTCTCGTCCTCTCCAAGGCTTTGTTCTCCTTCAGGGTGGCGAGGAGCAAACTCGTCAT
TGCACCGATCACCTCGAATTGTTCAGACAGGAGAGCTATTTCGCTTACTTGTTTGGAGTA
CAAGAGCCTGGATTTTATGGAGCTATTGATATTGCAAGTAGGAAATCTATGCTCTTTGCT
CCTAGGTTACCGGCTGACTATGCTGTTTGGATGGGAGAAATAAAACCACTTACTCACTTC
CAGGAAAAGTACAAGGTTACCCAGGTCTTCTATACTGATGAGATTAAGGAAGTTTTGTCT
AATCAGTACCAAGAGATGGGAACACCGTTGCTATTTCTCTTGCATGGGCTTAATACAGAT
AGCAATAAGTACTCTAAACCAGCAGAATTTCAGGGTATTAAGAAGTTCCAGACAGATTTA
AACACGTTGCATCCTATCCTGACTGAATGCCGTGTTACAAAGTCCAACTTAGAACTTGCT
CTCATTCAATTTGCCAATGACATAAGCACTGAAGCTCATGTTGAGGTAAGCATTGTTCTA
CCTTTTCAATGGGAAATTTCACTTACCATACTTCAATTTATTATAGTGTCCTGCACTTTT
TGCTATTTTTTCTGTAAAGAGCCAAAGCTAGATTTGAGATCAATTTTCAAATTATCAGCT
AATGCTACCATATTCTATTGCAGTGCTGTACTCCATTATGGTCATGCAGCAGCTCCAAAT
GACAAGACATTGCGAGAGGGAGATATGGCTCTTCTTGATATGGGAGCTGAATACCACTTT
TATGGGTCTGACATAACTTGTTCCTTTCCAGTAAATGGGAAATTTACTCGTGACCAGTCA
CTTGTATATACTGCTGTCCTCGACGCTCACGATGCTGTCATTTCTGCCATGAGCCCTGGA
GTGAGCTGGGTCGATATGCATAAATTAGCTGAAAAGATCATCTTGGAATCACTGAAGAAA
GGGCAGCTACTTGTTGGGGATGTTGATAAAATGATGACCGAGCGACTTGGTGCTGTTTTC
ATGCCTCATGGGTTGGGGCACCTACTTGGAATAGATACTCATGATCCTGGGGGTTACTTG
AAGGGAGCTGAAAGACCAAAAGAACCTGGATTGAGCTCTCTACGTACTAGCAGAAAGCTG
TTAGAGGGAATGGTGATCACTGTAGAGCCTGGTTGTTACTTCATTGATGCCTTACTACTT
CCTGCATTGGAGAGTCCGTCGGTGTCTGAGTTTTTCAATCATGGAGAGATCAACAGATTT
AGAGCTTTTGGTGGAGTCAGAATTGAAAGTGATGTGTGTGTTACTGCCAATGGATGCATT
AACATGACCAAATGTCCCCGGAAGATTGAAGAGATCGAGGCAGTGATGGCAGGGGTTCCT
TGGCCGATCAAAAAGACGACCTTGCCTTCCGGAAATGGACAAGTGTAA

Peptide Sequence

PEP ID

XP_016456509.1
PEP Infomation

PREDICTED: xaa-Pro dipeptidase-like [Nicotiana tabacum]
Sequence

MASSSPSSSSSSLSPPMIPMELHSLNREKLLNSLREHLSSSSRPLQGFVLLQGGEEQTRH
CTDHLELFRQESYFAYLFGVQEPGFYGAIDIASRKSMLFAPRLPADYAVWMGEIKPLTHF
QEKYKVTQVFYTDEIKEVLSNQYQEMGTPLLFLLHGLNTDSNKYSKPAEFQGIKKFQTDL
NTLHPILTECRVTKSNLELALIQFANDISTEAHVEVSIVLPFQWEISLTILQFIIVSCTF
CYFFCKEPKLDLRSIFKLSANATIFYCSAVLHYGHAAAPNDKTLREGDMALLDMGAEYHF
YGSDITCSFPVNGKFTRDQSLVYTAVLDAHDAVISAMSPGVSWVDMHKLAEKIILESLKK
GQLLVGDVDKMMTERLGAVFMPHGLGHLLGIDTHDPGGYLKGAERPKEPGLSSLRTSRKL
LEGMVITVEPGCYFIDALLLPALESPSVSEFFNHGEINRFRAFGGVRIESDVCVTANGCI
NMTKCPRKIEEIEAVMAGVPWPIKKTTLPSGNGQV

Transcript Sequence

Gene sequence data has not been registered.